HCSGD entry for FAM171B
1. General information
| Official gene symbol | FAM171B |
|---|---|
| Entrez ID | 165215 |
| Gene full name | family with sequence similarity 171, member B |
| Other gene symbols | KIAA1946 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0494590935 | 0.0244240568 | 0.4882649813 | 0.3005449275 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3041474180 |
| GSE13712_SHEAR | Down | -0.5521672581 |
| GSE13712_STATIC | Down | -0.1939541623 |
| GSE19018 | Down | -0.0904789458 |
| GSE19899_A1 | Up | 1.1741010645 |
| GSE19899_A2 | Up | 0.4802821378 |
| PubMed_21979375_A1 | Up | 0.1556509435 |
| PubMed_21979375_A2 | Up | 1.2530434003 |
| GSE35957 | Up | 0.1344051025 |
| GSE36640 | Down | -0.0276386274 |
| GSE54402 | Down | -0.7552246709 |
| GSE9593 | Up | 0.1918167440 |
| GSE43922 | Up | 0.5642314941 |
| GSE24585 | Up | 0.4707912450 |
| GSE37065 | Down | -0.1972469174 |
| GSE28863_A1 | Down | -1.1081848058 |
| GSE28863_A2 | Down | -0.7869985025 |
| GSE28863_A3 | Down | -1.0930960100 |
| GSE28863_A4 | Down | -0.3852932973 |
| GSE48662 | Up | 0.8760158364 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022182 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024632 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026167 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-99a-5p | MIMAT0000097 | MIRT048646 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
