HCSGD entry for AP1G1
1. General information
| Official gene symbol | AP1G1 |
|---|---|
| Entrez ID | 164 |
| Gene full name | adaptor-related protein complex 1, gamma 1 subunit |
| Other gene symbols | ADTG CLAPG1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0005215 | Transporter activity | TAS | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005737 | Cytoplasm | TAS | cellular_component |
| GO:0005765 | Lysosomal membrane | IDA TAS | cellular_component |
| GO:0005794 | Golgi apparatus | IDA IEA | cellular_component |
| GO:0005802 | Trans-Golgi network | IEA | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0006886 | Intracellular protein transport | IEA | biological_process |
| GO:0006892 | Post-Golgi vesicle-mediated transport | TAS | biological_process |
| GO:0008565 | Protein transporter activity | IEA | molecular_function |
| GO:0016032 | Viral process | TAS | biological_process |
| GO:0016192 | Vesicle-mediated transport | IEA | biological_process |
| GO:0019886 | Antigen processing and presentation of exogenous peptide antigen via MHC class II | TAS | biological_process |
| GO:0019894 | Kinesin binding | IPI | molecular_function |
| GO:0030117 | Membrane coat | IEA | cellular_component |
| GO:0030119 | AP-type membrane coat adaptor complex | TAS | cellular_component |
| GO:0030131 | Clathrin adaptor complex | IEA | cellular_component |
| GO:0030136 | Clathrin-coated vesicle | IDA | cellular_component |
| GO:0030659 | Cytoplasmic vesicle membrane | TAS | cellular_component |
| GO:0030665 | Clathrin-coated vesicle membrane | ISS | cellular_component |
| GO:0032588 | Trans-Golgi network membrane | TAS | cellular_component |
| GO:0048471 | Perinuclear region of cytoplasm | IEA | cellular_component |
| GO:0050690 | Regulation of defense response to virus by virus | TAS | biological_process |
| GO:0055037 | Recycling endosome | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4374133392 | 0.6815078378 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1546171346 |
| GSE13712_SHEAR | Down | -0.0312329555 |
| GSE13712_STATIC | Up | 0.0732929768 |
| GSE19018 | Down | -0.1203183066 |
| GSE19899_A1 | Down | -0.2100613508 |
| GSE19899_A2 | Up | 0.1001624946 |
| PubMed_21979375_A1 | Down | -0.4169567704 |
| PubMed_21979375_A2 | Up | 0.2823643669 |
| GSE35957 | Up | 0.2273076461 |
| GSE36640 | Up | 0.1315691377 |
| GSE54402 | Up | 0.0660159985 |
| GSE9593 | Up | 0.0955452758 |
| GSE43922 | Up | 0.0254590591 |
| GSE24585 | Up | 0.2132940136 |
| GSE37065 | Up | 0.2248650250 |
| GSE28863_A1 | Up | 0.2898479235 |
| GSE28863_A2 | Up | 0.1601282175 |
| GSE28863_A3 | Down | -0.6160877190 |
| GSE28863_A4 | Up | 0.1312678837 |
| GSE48662 | Down | -0.0302841682 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT020626 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT021107 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-145-5p | MIMAT0000437 | MIRT021529 | Reporter assay;Microarray | Functional MTI | 21351259 |
| hsa-miR-101-3p | MIMAT0000099 | MIRT027293 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT027948 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-652-3p | MIMAT0003322 | MIRT039485 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT041995 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-106b-5p | MIMAT0000680 | MIRT044261 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
