HCSGD entry for SYNE4

1. General information

Official gene symbolSYNE4
Entrez ID163183
Gene full namespectrin repeat containing, nuclear envelope family member 4
Other gene symbolsC19orf46 Nesp4
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003779Actin bindingIEAmolecular_function
GO:0031309Integral component of nuclear outer membraneISScellular_component
GO:0045198Establishment of epithelial cell apical/basal polarityISSbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.36843346760.78799469250.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0078284735
GSE13712_SHEARUp0.1441612158
GSE13712_STATICUp0.0997506600
GSE19018Up0.2105776881
GSE19899_A1Up0.0648205017
GSE19899_A2Down-0.0975037440
PubMed_21979375_A1Down-0.1697894390
PubMed_21979375_A2Down-0.2898793835
GSE35957Up0.2060976103
GSE36640Up0.3119817589
GSE54402Up0.0444249652
GSE9593Up0.2589663280
GSE43922Up0.0265013180
GSE24585Up0.0736168051
GSE37065Down-0.1224501737
GSE28863_A1Down-0.2705511252
GSE28863_A2Down-0.0407214881
GSE28863_A3Up0.4159647290
GSE28863_A4Up0.1629296567
GSE48662Down-0.0426357900

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.