HCSGD entry for ZNF780B
1. General information
| Official gene symbol | ZNF780B |
|---|---|
| Entrez ID | 163131 |
| Gene full name | zinc finger protein 780B |
| Other gene symbols | ZNF779 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3897857566 | 0.3652425896 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0169388134 |
| GSE13712_SHEAR | Up | 0.1186437940 |
| GSE13712_STATIC | Up | 0.1034130530 |
| GSE19018 | Down | -0.0818499867 |
| GSE19899_A1 | Down | -0.0544115235 |
| GSE19899_A2 | Down | -0.0884186561 |
| PubMed_21979375_A1 | Down | -0.1053673325 |
| PubMed_21979375_A2 | Up | 0.1523209028 |
| GSE35957 | Up | 0.0202710909 |
| GSE36640 | Down | -0.1869534069 |
| GSE54402 | Up | 0.0759682670 |
| GSE9593 | Down | -0.0636181008 |
| GSE43922 | Down | -0.1178184324 |
| GSE24585 | Up | 0.0252769283 |
| GSE37065 | Up | 0.0010770226 |
| GSE28863_A1 | Up | 0.7242782921 |
| GSE28863_A2 | Up | 0.0443333689 |
| GSE28863_A3 | Down | -0.9024886938 |
| GSE28863_A4 | Up | 0.2172927450 |
| GSE48662 | Up | 0.2013298540 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-30c-5p | MIMAT0000244 | MIRT047971 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
