HCSGD entry for RHBDL3
1. General information
| Official gene symbol | RHBDL3 |
|---|---|
| Entrez ID | 162494 |
| Gene full name | rhomboid, veinlet-like 3 (Drosophila) |
| Other gene symbols | RHBDL4 VRHO |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004252 | Serine-type endopeptidase activity | IEA | molecular_function |
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0006508 | Proteolysis | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6829701683 | 0.8559540937 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0059996453 |
| GSE13712_SHEAR | Down | -0.0417683136 |
| GSE13712_STATIC | Down | -0.0130586256 |
| GSE19018 | Up | 0.1151676021 |
| GSE19899_A1 | Up | 0.0578495279 |
| GSE19899_A2 | Down | -0.0230873793 |
| PubMed_21979375_A1 | Up | 0.0249937210 |
| PubMed_21979375_A2 | Down | -0.1579828364 |
| GSE35957 | Up | 0.0955472775 |
| GSE36640 | Up | 0.0426309060 |
| GSE54402 | Down | -0.0095741376 |
| GSE9593 | Down | -0.0883089292 |
| GSE43922 | Up | 0.0981059030 |
| GSE24585 | Up | 0.1745240416 |
| GSE37065 | Down | -0.0634238530 |
| GSE28863_A1 | Down | -0.1410095560 |
| GSE28863_A2 | Down | -0.0358678481 |
| GSE28863_A3 | Up | 0.3858291918 |
| GSE28863_A4 | Up | 0.0782900011 |
| GSE48662 | Up | 0.0539177917 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-615-3p | MIMAT0003283 | MIRT039850 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
