HCSGD entry for TMEM30B
1. General information
| Official gene symbol | TMEM30B |
|---|---|
| Entrez ID | 161291 |
| Gene full name | transmembrane protein 30B |
| Other gene symbols | CDC50B |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0070863 | Positive regulation of protein exit from endoplasmic reticulum | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2684470803 | 0.5070648950 | 0.9655364307 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0641425374 |
| GSE13712_SHEAR | Down | -0.2143657764 |
| GSE13712_STATIC | Up | 0.0366301033 |
| GSE19018 | Up | 0.0120294033 |
| GSE19899_A1 | Up | 0.0411137447 |
| GSE19899_A2 | Down | -0.0129716386 |
| PubMed_21979375_A1 | Down | -0.0416082708 |
| PubMed_21979375_A2 | Down | -0.0641622682 |
| GSE35957 | Up | 0.6847671038 |
| GSE36640 | Down | -0.4151092803 |
| GSE54402 | Down | -0.3070581036 |
| GSE9593 | Up | 0.0309737688 |
| GSE43922 | Down | -0.0023129063 |
| GSE24585 | Up | 0.0240281124 |
| GSE37065 | Down | -0.0423654124 |
| GSE28863_A1 | Up | 0.5157236325 |
| GSE28863_A2 | Up | 0.1798144041 |
| GSE28863_A3 | Up | 0.6315237590 |
| GSE28863_A4 | Down | -0.0320137329 |
| GSE48662 | Up | 0.0373973550 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018891 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT030135 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
