HCSGD entry for TMTC3
1. General information
| Official gene symbol | TMTC3 |
|---|---|
| Entrez ID | 160418 |
| Gene full name | transmembrane and tetratricopeptide repeat containing 3 |
| Other gene symbols | SMILE |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0009791 | Post-embryonic development | IEA | biological_process |
| GO:0010468 | Regulation of gene expression | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0048286 | Lung alveolus development | IEA | biological_process |
| GO:0048747 | Muscle fiber development | IEA | biological_process |
| GO:0060447 | Bud outgrowth involved in lung branching | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4040259109 | 0.2186896470 | 0.9999902473 | 0.8995585091 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1428170702 |
| GSE13712_SHEAR | Up | 0.1395314851 |
| GSE13712_STATIC | Up | 0.2554265958 |
| GSE19018 | Up | 0.4262188896 |
| GSE19899_A1 | Down | -0.1088556599 |
| GSE19899_A2 | Down | -0.3885176340 |
| PubMed_21979375_A1 | Down | -0.2011352278 |
| PubMed_21979375_A2 | Up | 0.0163447394 |
| GSE35957 | Down | -0.0413781871 |
| GSE36640 | Up | 0.4650435093 |
| GSE54402 | Down | -0.6039656383 |
| GSE9593 | Down | -0.1947211776 |
| GSE43922 | Up | 0.0195326973 |
| GSE24585 | Up | 0.2892845990 |
| GSE37065 | Up | 0.2077188661 |
| GSE28863_A1 | Down | -0.2639621990 |
| GSE28863_A2 | Up | 0.1103153985 |
| GSE28863_A3 | Down | -0.7144388706 |
| GSE28863_A4 | Up | 0.2688811471 |
| GSE48662 | Down | -0.2040713355 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-29c-3p | MIMAT0000681 | MIRT020400 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT020906 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-128-3p | MIMAT0000424 | MIRT022084 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024869 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026736 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-101-3p | MIMAT0000099 | MIRT027336 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-27a-3p | MIMAT0000084 | MIRT028696 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031901 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-let-7d-5p | MIMAT0000065 | MIRT032149 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT032434 | Proteomics | Functional MTI (Weak) | 18668040 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
