HCSGD entry for RHOXF1

1. General information

Official gene symbolRHOXF1
Entrez ID158800
Gene full nameRhox homeobox family, member 1
Other gene symbolsOTEX PEPP1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000976Transcription regulatory region sequence-specific DNA bindingIEAmolecular_function
GO:0003677DNA bindingNASmolecular_function
GO:0003700Sequence-specific DNA binding transcription factor activityNASmolecular_function
GO:0005634NucleusIDAcellular_component
GO:0006351Transcription, DNA-templatedIEAbiological_process
GO:0006355Regulation of transcription, DNA-templatedNASbiological_process
GO:0007275Multicellular organismal developmentNASbiological_process
GO:0007276Gamete generationNASbiological_process
GO:0019953Sexual reproductionIEPbiological_process
GO:0030518Intracellular steroid hormone receptor signaling pathwayNASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.39943357020.86208694960.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.1732523208
GSE13712_SHEARUp0.0118499078
GSE13712_STATICUp0.1564156214
GSE19018Up0.0088211248
GSE19899_A1Up0.0606038336
GSE19899_A2Up0.0470584049
PubMed_21979375_A1Up0.1080801951
PubMed_21979375_A2Down-0.1012119767
GSE35957Up0.1016820083
GSE36640Up0.0220611485
GSE54402Up0.0229843840
GSE9593Down-0.0222398712
GSE43922Up0.0243098716
GSE24585Up0.2991850474
GSE37065Up0.0545318169
GSE28863_A1Up0.1510755864
GSE28863_A2Up0.1616539428
GSE28863_A3Up0.4594495093
GSE28863_A4Down-0.2176873652
GSE48662Up0.0851877782

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.