HCSGD entry for FREM1
1. General information
| Official gene symbol | FREM1 |
|---|---|
| Entrez ID | 158326 |
| Gene full name | FRAS1 related extracellular matrix 1 |
| Other gene symbols | BNAR C9orf143 C9orf145 C9orf154 MOTA TILRR TRIGNO2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005604 | Basement membrane | IEA | cellular_component |
| GO:0007154 | Cell communication | IEA | biological_process |
| GO:0007160 | Cell-matrix adhesion | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030246 | Carbohydrate binding | IEA | molecular_function |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
| GO:0097094 | Craniofacial suture morphogenesis | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8747525892 | 0.7018385282 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0931776857 |
| GSE13712_SHEAR | Up | 0.0378446879 |
| GSE13712_STATIC | Up | 0.0709627971 |
| GSE19018 | Up | 0.0517659706 |
| GSE19899_A1 | Up | 0.0685137315 |
| GSE19899_A2 | Up | 0.0161546769 |
| PubMed_21979375_A1 | Up | 0.0153791049 |
| PubMed_21979375_A2 | Down | -0.0366740337 |
| GSE35957 | Up | 0.0372840675 |
| GSE36640 | Up | 0.0038347435 |
| GSE54402 | Up | 0.0091058069 |
| GSE9593 | Down | -0.0787935876 |
| GSE43922 | Up | 0.0179083270 |
| GSE24585 | Down | -0.0829639100 |
| GSE37065 | Up | 0.0013161160 |
| GSE28863_A1 | Down | -0.1353807400 |
| GSE28863_A2 | Down | -0.1372942205 |
| GSE28863_A3 | Up | 0.0098278931 |
| GSE28863_A4 | Down | -0.0686795101 |
| GSE48662 | Up | 0.0292181739 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017119 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
