HCSGD entry for TTC39B
1. General information
| Official gene symbol | TTC39B |
|---|---|
| Entrez ID | 158219 |
| Gene full name | tetratricopeptide repeat domain 39B |
| Other gene symbols | C9orf52 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
Not in the Gene ontology4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8367746400 | 0.0716384788 | 0.9999902473 | 0.5048450870 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0297518068 |
| GSE13712_SHEAR | Down | -0.2664325107 |
| GSE13712_STATIC | Down | -0.0286143897 |
| GSE19018 | Up | 0.1275748096 |
| GSE19899_A1 | Down | -0.0005038317 |
| GSE19899_A2 | Down | -0.6240178695 |
| PubMed_21979375_A1 | Down | -0.3904149939 |
| PubMed_21979375_A2 | Down | -0.6860387781 |
| GSE35957 | Down | -0.4831266291 |
| GSE36640 | Down | -0.0128692086 |
| GSE54402 | Down | -0.3912237850 |
| GSE9593 | Up | 0.1418113193 |
| GSE43922 | Up | 0.0556334649 |
| GSE24585 | Up | 0.3396490775 |
| GSE37065 | Up | 0.3414350941 |
| GSE28863_A1 | Up | 0.2943404312 |
| GSE28863_A2 | Down | -0.1803608369 |
| GSE28863_A3 | Down | -0.8803042948 |
| GSE28863_A4 | Up | 0.0720797015 |
| GSE48662 | Down | -0.1768002093 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018991 | Microarray | Functional MTI (Weak) | 18185580 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
