HCSGD entry for FAM84B
1. General information
| Official gene symbol | FAM84B |
|---|---|
| Entrez ID | 157638 |
| Gene full name | family with sequence similarity 84, member B |
| Other gene symbols | BCMP101 NSE2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005886 | Plasma membrane | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8259619505 | 0.0770344782 | 0.9999902473 | 0.5246384894 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0007748158 |
| GSE13712_SHEAR | Down | -0.6392580902 |
| GSE13712_STATIC | Down | -0.4572004990 |
| GSE19018 | Down | -0.0165354389 |
| GSE19899_A1 | Up | 0.0425197819 |
| GSE19899_A2 | Up | 0.0156852699 |
| PubMed_21979375_A1 | Up | 0.0444733176 |
| PubMed_21979375_A2 | Down | -0.1359269198 |
| GSE35957 | Up | 0.1712251607 |
| GSE36640 | Up | 0.1504324323 |
| GSE54402 | Up | 0.2819331070 |
| GSE9593 | Up | 0.0015386148 |
| GSE43922 | Up | 0.0105323962 |
| GSE24585 | Down | -1.4702450186 |
| GSE37065 | Down | -0.0454142748 |
| GSE28863_A1 | Down | -0.4428043160 |
| GSE28863_A2 | Down | -0.1186155182 |
| GSE28863_A3 | Up | 0.2734321422 |
| GSE28863_A4 | Up | 0.0420385307 |
| GSE48662 | Up | 0.4874058556 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT016822 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052286 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
