HCSGD entry for RNF217
1. General information
| Official gene symbol | RNF217 |
|---|---|
| Entrez ID | 154214 |
| Gene full name | ring finger protein 217 |
| Other gene symbols | C6orf172 IBRDC1 dJ84N20.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004842 | Ubiquitin-protein ligase activity | ISS | molecular_function |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0042787 | Protein ubiquitination involved in ubiquitin-dependent protein catabolic process | ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9563717108 | 0.0182934007 | 0.9999902473 | 0.2644154860 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.8408126948 |
| GSE13712_SHEAR | Up | 0.1937358027 |
| GSE13712_STATIC | Up | 0.1030833636 |
| GSE19018 | Down | -0.0961361649 |
| GSE19899_A1 | Down | -0.4862924158 |
| GSE19899_A2 | Down | -0.8818000600 |
| PubMed_21979375_A1 | Down | -0.6564734465 |
| PubMed_21979375_A2 | Down | -0.5627854228 |
| GSE35957 | Up | 0.0272288972 |
| GSE36640 | Up | 0.1457373261 |
| GSE54402 | Down | -0.4504911684 |
| GSE9593 | Up | 0.1138516778 |
| GSE43922 | Down | -0.8401755310 |
| GSE24585 | Down | -0.4296885299 |
| GSE37065 | Up | 0.1319140668 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 0.1062132900 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-103a-3p | MIMAT0000101 | MIRT027193 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031927 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
