HCSGD entry for NFXL1
1. General information
| Official gene symbol | NFXL1 |
|---|---|
| Entrez ID | 152518 |
| Gene full name | nuclear transcription factor, X-box binding-like 1 |
| Other gene symbols | HOZFP URCC5 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9851962539 | 0.0094046237 | 0.9999902473 | 0.1917421379 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3734200384 |
| GSE13712_SHEAR | Down | -0.0623803726 |
| GSE13712_STATIC | Down | -0.0905700242 |
| GSE19018 | Up | 0.4278198196 |
| GSE19899_A1 | Down | -0.8756527085 |
| GSE19899_A2 | Down | -0.6851378663 |
| PubMed_21979375_A1 | Down | -0.7047823550 |
| PubMed_21979375_A2 | Down | -0.5657762831 |
| GSE35957 | Down | -0.7460079474 |
| GSE36640 | Down | -0.6100386974 |
| GSE54402 | Down | -0.1579858611 |
| GSE9593 | Down | -0.3100675530 |
| GSE43922 | Down | -0.1164173075 |
| GSE24585 | Down | -0.3729566878 |
| GSE37065 | Down | -0.0299347465 |
| GSE28863_A1 | Up | 0.1416494263 |
| GSE28863_A2 | Up | 0.2019651437 |
| GSE28863_A3 | Down | -0.7621660734 |
| GSE28863_A4 | Down | -0.1928093906 |
| GSE48662 | Down | -0.0667435131 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-500a-5p | MIMAT0004773 | MIRT038003 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
