HCSGD entry for HSCB
1. General information
| Official gene symbol | HSCB |
|---|---|
| Entrez ID | 150274 |
| Gene full name | HscB iron-sulfur cluster co-chaperone homolog (E. coli) |
| Other gene symbols | DNAJC20 HSC20 JAC1 dJ366L4.2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005739 | Mitochondrion | IDA TAS | cellular_component |
| GO:0006457 | Protein folding | IEA | biological_process |
| GO:0016226 | Iron-sulfur cluster assembly | IMP | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
| GO:0051087 | Chaperone binding | IEA | molecular_function |
| GO:0051259 | Protein oligomerization | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2991520649 | 0.6345110064 | 0.9982228068 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.4077851474 |
| GSE13712_SHEAR | Up | 0.1820100967 |
| GSE13712_STATIC | Up | 0.1391570646 |
| GSE19018 | Down | -0.2465442376 |
| GSE19899_A1 | Up | 0.1744642497 |
| GSE19899_A2 | Up | 0.4599329668 |
| PubMed_21979375_A1 | Up | 0.0210275177 |
| PubMed_21979375_A2 | Up | 0.5168587400 |
| GSE35957 | Down | -0.2660837951 |
| GSE36640 | Down | -0.0665955159 |
| GSE54402 | Down | -0.0161511872 |
| GSE9593 | Down | -0.0706458582 |
| GSE43922 | Up | 0.0506308928 |
| GSE24585 | Down | -0.1091184944 |
| GSE37065 | Up | 0.0826907513 |
| GSE28863_A1 | Down | -0.1915179333 |
| GSE28863_A2 | Down | -0.1890309176 |
| GSE28863_A3 | Down | -0.0285630805 |
| GSE28863_A4 | Up | 0.1391081857 |
| GSE48662 | Down | -0.0462698413 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1303 | MIMAT0005891 | MIRT035893 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
