HCSGD entry for SAMD11
1. General information
| Official gene symbol | SAMD11 |
|---|---|
| Entrez ID | 148398 |
| Gene full name | sterile alpha motif domain containing 11 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000122 | Negative regulation of transcription from RNA polymerase II promoter | IEA | biological_process |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0032093 | SAM domain binding | IEA | molecular_function |
| GO:0042731 | PH domain binding | IEA | molecular_function |
| GO:0043621 | Protein self-association | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7182828502 | 0.0803508643 | 0.9999902473 | 0.5363720771 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3275532137 |
| GSE13712_SHEAR | Down | -0.0520305903 |
| GSE13712_STATIC | Up | 0.0378516220 |
| GSE19018 | Down | -0.0796195597 |
| GSE19899_A1 | Up | 0.0877466863 |
| GSE19899_A2 | Down | -0.5288109634 |
| PubMed_21979375_A1 | Down | -0.1884852027 |
| PubMed_21979375_A2 | Down | -0.1310571514 |
| GSE35957 | Down | -0.1745158493 |
| GSE36640 | Up | 0.0638630625 |
| GSE54402 | Down | -0.0295170176 |
| GSE9593 | Down | -0.6107643066 |
| GSE43922 | Up | 0.0591268557 |
| GSE24585 | Up | 1.2803809867 |
| GSE37065 | Down | -0.1071501374 |
| GSE28863_A1 | Down | -0.2043142054 |
| GSE28863_A2 | Down | -0.6885296086 |
| GSE28863_A3 | Down | -0.0460709401 |
| GSE28863_A4 | Down | -0.0974729667 |
| GSE48662 | Up | 0.6089193141 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-375 | MIMAT0000728 | MIRT019690 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022194 | Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
