HCSGD entry for SYT6

1. General information

Official gene symbolSYT6
Entrez ID148281
Gene full namesynaptotagmin VI
Other gene symbolssytVI
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005215Transporter activityIEAmolecular_function
GO:0005544Calcium-dependent phospholipid bindingIDAmolecular_function
GO:0005829CytosolISScellular_component
GO:0005886Plasma membraneISScellular_component
GO:0007340Acrosome reactionIEAbiological_process
GO:0016021Integral component of membraneIEA ISScellular_component
GO:0019898Extrinsic component of membraneIEA ISScellular_component
GO:0019905Syntaxin bindingIDAmolecular_function
GO:0030054Cell junctionIEAcellular_component
GO:0030276Clathrin bindingIDAmolecular_function
GO:0030672Synaptic vesicle membraneIEAcellular_component
GO:0042803Protein homodimerization activityIEA ISSmolecular_function
GO:0046872Metal ion bindingIEAmolecular_function
GO:0046982Protein heterodimerization activityIEAmolecular_function
GO:0048306Calcium-dependent protein bindingIEAmolecular_function
GO:0060478Acrosomal vesicle exocytosisIMPbiological_process
GO:0097038Perinuclear endoplasmic reticulumIEA ISScellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.54910827100.87330785300.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0421691590
GSE13712_SHEARDown-0.1062650480
GSE13712_STATICUp0.1520153837
GSE19018Up0.1029135114
GSE19899_A1Up0.2617251649
GSE19899_A2Up0.2272827856
PubMed_21979375_A1Up0.1794060935
PubMed_21979375_A2Down-0.1249110073
GSE35957Up0.1580880909
GSE36640Up0.1431369241
GSE54402Up0.0018039449
GSE9593Down-0.1864434476
GSE43922Up0.0219377356
GSE24585Down-0.2711541658
GSE37065Up0.0296039182
GSE28863_A1Down-0.0494903763
GSE28863_A2Down-0.0007261619
GSE28863_A3Up0.1530999388
GSE28863_A4Up0.0340151296
GSE48662Up0.0675159370

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.