HCSGD entry for SIX5
1. General information
Official gene symbol | SIX5 |
---|---|
Entrez ID | 147912 |
Gene full name | SIX homeobox 5 |
Other gene symbols | BOR2 DMAHP |
Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network

This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
---|---|---|---|
GO:0002088 | Lens development in camera-type eye | IEA | biological_process |
GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
GO:0005515 | Protein binding | IPI | molecular_function |
GO:0005634 | Nucleus | IEA | cellular_component |
GO:0005737 | Cytoplasm | IDA | cellular_component |
GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
GO:0007286 | Spermatid development | IEA | biological_process |
GO:0008285 | Negative regulation of cell proliferation | IEA | biological_process |
GO:0043565 | Sequence-specific DNA binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
p-value up | p-value down | FDR up | FDR down |
---|---|---|---|
0.4194074617 | 0.8322639565 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
Data source | Up or down | Log fold change |
---|---|---|
GSE11954 | Down | -0.0229420467 |
GSE13712_SHEAR | Down | -0.1773492554 |
GSE13712_STATIC | Down | -0.0076946154 |
GSE19018 | Down | -0.0397550773 |
GSE19899_A1 | Down | -0.0729864926 |
GSE19899_A2 | Up | 0.3109361019 |
PubMed_21979375_A1 | Up | 0.0338313772 |
PubMed_21979375_A2 | Up | 0.4717542409 |
GSE35957 | Up | 0.0139496331 |
GSE36640 | Up | 0.0418143081 |
GSE54402 | Up | 0.0371675022 |
GSE9593 | Up | 0.0268767403 |
GSE43922 | Up | 0.0527975594 |
GSE24585 | Up | 0.1766282133 |
GSE37065 | Down | -0.2041646087 |
GSE28863_A1 | Up | 0.1399045687 |
GSE28863_A2 | Down | -0.1979821717 |
GSE28863_A3 | Up | 0.2890644445 |
GSE28863_A4 | Down | -0.0349273380 |
GSE48662 | Up | 0.3904730769 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
---|---|---|---|---|---|
hsa-miR-26b-5p | MIMAT0000083 | MIRT029180 | Microarray | Functional MTI (Weak) | 19088304 |
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