HCSGD entry for LYPD4

1. General information

Official gene symbolLYPD4
Entrez ID147719
Gene full nameLY6/PLAUR domain containing 4
Other gene symbolsSMR
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005886Plasma membraneIEAcellular_component
GO:0031225Anchored component of membraneIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.51735601610.44733095250.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0119862245
GSE13712_SHEARDown-0.1156761617
GSE13712_STATICDown-0.1275877371
GSE19018Up0.1020390059
GSE19899_A1Up0.0576443387
GSE19899_A2Down-0.0493675509
PubMed_21979375_A1Up0.3961985887
PubMed_21979375_A2Up0.0221951045
GSE35957Up0.2540552279
GSE36640Up0.0663107801
GSE54402Down-0.0334080962
GSE9593Down-0.0090900248
GSE43922Up0.1090209127
GSE24585Down-0.0205611871
GSE37065Up0.0204869063
GSE28863_A1Down-0.4911172146
GSE28863_A2Down-0.6758221618
GSE28863_A3Up0.3856116721
GSE28863_A4Up0.2072085484
GSE48662Up0.0463091355

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-335-5pMIMAT0000765MIRT016892MicroarrayFunctional MTI (Weak)18185580
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.