HCSGD entry for EME1
1. General information
| Official gene symbol | EME1 |
|---|---|
| Entrez ID | 146956 |
| Gene full name | essential meiotic endonuclease 1 homolog 1 (S. pombe) |
| Other gene symbols | MMS4L SLX2A |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0004518 | Nuclease activity | IEA | molecular_function |
| GO:0004519 | Endonuclease activity | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005730 | Nucleolus | IEA | cellular_component |
| GO:0006281 | DNA repair | IEA | biological_process |
| GO:0006310 | DNA recombination | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8656859960 | 0.0611838228 | 0.9999902473 | 0.4660135995 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0066858791 |
| GSE13712_SHEAR | Up | 0.0545562670 |
| GSE13712_STATIC | Up | 0.0934859959 |
| GSE19018 | Up | 0.0091075850 |
| GSE19899_A1 | Up | 0.0523509639 |
| GSE19899_A2 | Down | -0.7896379271 |
| PubMed_21979375_A1 | Down | -0.3776273656 |
| PubMed_21979375_A2 | Down | -0.8615548185 |
| GSE35957 | Down | -0.2686473434 |
| GSE36640 | Down | -1.0543108033 |
| GSE54402 | Down | -0.1045128819 |
| GSE9593 | Down | -0.2531354574 |
| GSE43922 | Down | -0.3360838734 |
| GSE24585 | Up | 0.1810649567 |
| GSE37065 | Down | -0.0554278139 |
| GSE28863_A1 | Down | -0.1534734340 |
| GSE28863_A2 | Up | 0.2453913998 |
| GSE28863_A3 | Down | -0.1395979435 |
| GSE28863_A4 | Up | 0.1390579347 |
| GSE48662 | Down | -0.0693376224 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024520 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026676 | Microarray | Functional MTI (Weak) | 19074876 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
