HCSGD entry for NCAN

1. General information

Official gene symbolNCAN
Entrez ID1463
Gene full nameneurocan
Other gene symbolsCSPG3
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005509Calcium ion bindingIEAmolecular_function
GO:0005540Hyaluronic acid bindingIEAmolecular_function
GO:0005576Extracellular regionTAScellular_component
GO:0005796Golgi lumenTAScellular_component
GO:0005975Carbohydrate metabolic processTASbiological_process
GO:0007155Cell adhesionIEAbiological_process
GO:0007411Axon guidanceTASbiological_process
GO:0030198Extracellular matrix organizationTASbiological_process
GO:0030203Glycosaminoglycan metabolic processTASbiological_process
GO:0030204Chondroitin sulfate metabolic processTASbiological_process
GO:0030206Chondroitin sulfate biosynthetic processTASbiological_process
GO:0030207Chondroitin sulfate catabolic processTASbiological_process
GO:0030208Dermatan sulfate biosynthetic processTASbiological_process
GO:0030246Carbohydrate bindingIEAmolecular_function
GO:0043202Lysosomal lumenTAScellular_component
GO:0044281Small molecule metabolic processTASbiological_process
GO:0051823Regulation of synapse structural plasticityIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.50068506520.85355523730.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0087476411
GSE13712_SHEARDown-0.1003940511
GSE13712_STATICDown-0.0440110307
GSE19018Up0.1047589462
GSE19899_A1Up0.0132052222
GSE19899_A2Up0.3671133257
PubMed_21979375_A1Down-0.0756427570
PubMed_21979375_A2Down-0.2632382845
GSE35957Up0.0467001955
GSE36640Up0.1496224474
GSE54402Down-0.0022054484
GSE9593Down-0.0124416965
GSE43922Up0.1072330930
GSE24585Up0.0883642646
GSE37065Up0.0113279318
GSE28863_A1Down-0.2089585994
GSE28863_A2Down-0.1426222445
GSE28863_A3Up0.3641664596
GSE28863_A4Up0.1311907997
GSE48662Up0.2671188177

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Name

Drug

Accession number

Beta-D-GlucoseDB02379 EXPT00685 | EXPT00455 | EXPT01603
ThiodigalactosideDB04396 EXPT03030
Hyaluronic acidDB08818 -

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-342-3pMIMAT0000753MIRT043672CLASHFunctional MTI (Weak)23622248
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.