HCSGD entry for FAM109A
1. General information
| Official gene symbol | FAM109A |
|---|---|
| Entrez ID | 144717 |
| Gene full name | family with sequence similarity 109, member A |
| Other gene symbols | IPIP27A SES1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001881 | Receptor recycling | IMP | biological_process |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005769 | Early endosome | IDA | cellular_component |
| GO:0005794 | Golgi apparatus | IEA | cellular_component |
| GO:0005802 | Trans-Golgi network | IDA | cellular_component |
| GO:0007032 | Endosome organization | IMP | biological_process |
| GO:0030136 | Clathrin-coated vesicle | IDA | cellular_component |
| GO:0042147 | Retrograde transport, endosome to Golgi | IMP | biological_process |
| GO:0042803 | Protein homodimerization activity | IPI | molecular_function |
| GO:0055037 | Recycling endosome | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0463804529 | 0.9766060864 | 0.4778003523 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1014906215 |
| GSE13712_SHEAR | Down | -0.4231382088 |
| GSE13712_STATIC | Up | 0.1735706343 |
| GSE19018 | Down | -0.0654863896 |
| GSE19899_A1 | Up | 0.0700643946 |
| GSE19899_A2 | Up | 0.8067509632 |
| PubMed_21979375_A1 | Up | 1.4308742668 |
| PubMed_21979375_A2 | Up | 0.5635081898 |
| GSE35957 | Up | 0.2505317603 |
| GSE36640 | Up | 0.3374457516 |
| GSE54402 | Up | 0.6834088113 |
| GSE9593 | Up | 0.1225706194 |
| GSE43922 | Up | 0.1322799245 |
| GSE24585 | Up | 0.0647680371 |
| GSE37065 | Down | -0.0694743701 |
| GSE28863_A1 | Up | 0.0015435142 |
| GSE28863_A2 | Down | -0.0559047403 |
| GSE28863_A3 | Up | 0.2429315679 |
| GSE28863_A4 | Down | -0.0533582060 |
| GSE48662 | Up | 0.2421874866 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-615-3p | MIMAT0003283 | MIRT040229 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
