HCSGD entry for LINC00477

1. General information

Official gene symbolLINC00477
Entrez ID144360
Gene full namelong intergenic non-protein coding RNA 477
Other gene symbolsC12orf67 FAM191B
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0016021Integral component of membraneIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.49245602370.90945197750.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0443030126
GSE13712_SHEARDown-0.1103513178
GSE13712_STATICUp0.1708009831
GSE19018Down-0.0011356194
GSE19899_A1Up0.0353489152
GSE19899_A2Up0.0565923734
PubMed_21979375_A1Down-0.1214774033
PubMed_21979375_A2Up0.1421971248
GSE35957Up0.2737642435
GSE36640Up0.2041914992
GSE54402Up0.1084868272
GSE9593Up0.0109865496
GSE43922Up0.0135178043
GSE24585Down-0.0577084328
GSE37065Down-0.0090448162
GSE28863_A1Down-0.0356441826
GSE28863_A2Down-0.0422960583
GSE28863_A3Up0.1681189925
GSE28863_A4Up0.1691988404
GSE48662Up0.0340559086

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.