HCSGD entry for SOGA1
1. General information
| Official gene symbol | SOGA1 |
|---|---|
| Entrez ID | 140710 |
| Gene full name | suppressor of glucose, autophagy associated 1 |
| Other gene symbols | C20orf117 KIAA0889 SOGA |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005615 | Extracellular space | IDA IEA | cellular_component |
| GO:0010506 | Regulation of autophagy | IEA ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4468626458 | 0.2618512936 | 0.9999902473 | 0.9829132772 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0906572174 |
| GSE13712_SHEAR | Down | -0.3021596765 |
| GSE13712_STATIC | Down | -0.0561790423 |
| GSE19018 | Up | 0.1156522930 |
| GSE19899_A1 | Down | -0.0930264134 |
| GSE19899_A2 | Down | -0.2216042069 |
| PubMed_21979375_A1 | Down | -0.3020515771 |
| PubMed_21979375_A2 | Down | -0.3849791191 |
| GSE35957 | Down | -0.0610935472 |
| GSE36640 | Down | -0.5094346197 |
| GSE54402 | Down | -0.3031803923 |
| GSE9593 | Down | -0.1461096166 |
| GSE43922 | Up | 0.0501245897 |
| GSE24585 | Down | -0.1672436009 |
| GSE37065 | Down | -0.0915191702 |
| GSE28863_A1 | Up | 0.7881910786 |
| GSE28863_A2 | Up | 0.7760257986 |
| GSE28863_A3 | Up | 0.2745493439 |
| GSE28863_A4 | Up | 0.2414215294 |
| GSE48662 | Up | 0.1276576431 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-22-3p | MIMAT0000077 | MIRT030652 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-19b-3p | MIMAT0000074 | MIRT031173 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-92b-3p | MIMAT0003218 | MIRT040613 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-100-5p | MIMAT0000098 | MIRT048567 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
