HCSGD entry for CTCFL

1. General information

Official gene symbolCTCFL
Entrez ID140690
Gene full nameCCCTC-binding factor (zinc finger protein)-like
Other gene symbolsBORIS CT27 CTCF-T HMGB1L1 dJ579F20.2
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003676Nucleic acid bindingIEAmolecular_function
GO:0003677DNA bindingIDAmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005634NucleusIDA ISScellular_component
GO:0005737CytoplasmIDAcellular_component
GO:0006349Regulation of gene expression by genetic imprintingISSbiological_process
GO:0006351Transcription, DNA-templatedIEAbiological_process
GO:0007049Cell cycleIEAbiological_process
GO:0010628Positive regulation of gene expressionIDAbiological_process
GO:0016571Histone methylationISSbiological_process
GO:0042393Histone bindingISSmolecular_function
GO:0043046DNA methylation involved in gamete generationISSbiological_process
GO:0043565Sequence-specific DNA bindingISSmolecular_function
GO:0044212Transcription regulatory region DNA bindingIDAmolecular_function
GO:0045893Positive regulation of transcription, DNA-templatedIDAbiological_process
GO:0046872Metal ion bindingIEAmolecular_function
GO:0051569Regulation of histone H3-K4 methylationIMPbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.64556727710.79128469660.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0477020428
GSE13712_SHEARDown-0.0689986991
GSE13712_STATICDown-0.0010782269
GSE19018Down-0.0203292361
GSE19899_A1Down-0.0406210998
GSE19899_A2Up0.0881222174
PubMed_21979375_A1Up0.0211045621
PubMed_21979375_A2Up0.1844986455
GSE35957Up0.1048480233
GSE36640Up0.0129292173
GSE54402Down-0.0142379090
GSE9593Down-0.0379366353
GSE43922Up0.0977559410
GSE24585Down-0.1430040737
GSE37065Up0.2503359348
GSE28863_A1Down-0.1093393890
GSE28863_A2Down-0.0420065924
GSE28863_A3Up0.2621446717
GSE28863_A4Up0.0629800793
GSE48662Down-0.1071288511

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: 1 abstracts the gene occurs.


PubMed ID of the article

Sentenece the gene occurs

25279549BORIS/CTCFL is a member of cancer testis antigen family normally expressed in germ cells
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