HCSGD entry for GATA5

1. General information

Official gene symbolGATA5
Entrez ID140628
Gene full nameGATA binding protein 5
Other gene symbolsbB379O24.1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001158Enhancer sequence-specific DNA bindingIEAmolecular_function
GO:0003700Sequence-specific DNA binding transcription factor activityIDAmolecular_function
GO:0003705RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activityIEAmolecular_function
GO:0005634NucleusIDAcellular_component
GO:0005654NucleoplasmTAScellular_component
GO:0007596Blood coagulationTASbiological_process
GO:0008270Zinc ion bindingIEAmolecular_function
GO:0044212Transcription regulatory region DNA bindingIDAmolecular_function
GO:0045944Positive regulation of transcription from RNA polymerase II promoterIDAbiological_process
GO:0060575Intestinal epithelial cell differentiationIDAbiological_process
GO:0071773Cellular response to BMP stimulusIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.53647293420.89463370690.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0233358414
GSE13712_SHEARUp0.1990776996
GSE13712_STATICDown-0.1331028851
GSE19018Up0.0154077281
GSE19899_A1Up0.0447201507
GSE19899_A2Up0.0388595279
PubMed_21979375_A1Up0.2796652368
PubMed_21979375_A2Up0.0267162226
GSE35957Up0.2656884228
GSE36640Up0.0318030573
GSE54402Up0.0261648238
GSE9593Down-0.1251052432
GSE43922Up0.1367830249
GSE24585Up0.1332105582
GSE37065Down-0.0930537161
GSE28863_A1Down-0.1649287571
GSE28863_A2Down-0.0377298214
GSE28863_A3Up0.3510035429
GSE28863_A4Up0.1047224537
GSE48662Up0.0116830880

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-335-5pMIMAT0000765MIRT018574MicroarrayFunctional MTI (Weak)18185580
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.