HCSGD entry for SPIN4
1. General information
| Official gene symbol | SPIN4 |
|---|---|
| Entrez ID | 139886 |
| Gene full name | spindlin family, member 4 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0007276 | Gamete generation | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9954605296 | 0.0000532503 | 0.9999902473 | 0.0118779661 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -1.3663970989 |
| GSE13712_SHEAR | Down | -1.1906461413 |
| GSE13712_STATIC | Down | -0.9245644610 |
| GSE19018 | Down | -1.1922320470 |
| GSE19899_A1 | Down | -1.7358915710 |
| GSE19899_A2 | Down | -3.5418742914 |
| PubMed_21979375_A1 | Down | -2.5115914076 |
| PubMed_21979375_A2 | Down | -5.4356586243 |
| GSE35957 | Down | -1.0209616606 |
| GSE36640 | Down | -2.7342043326 |
| GSE54402 | Down | -0.5071708827 |
| GSE9593 | Down | -0.9395657991 |
| GSE43922 | Down | -0.7930522195 |
| GSE24585 | Up | 0.1147908581 |
| GSE37065 | Down | -0.3672399304 |
| GSE28863_A1 | Up | 0.1593244786 |
| GSE28863_A2 | Down | -0.1634086091 |
| GSE28863_A3 | Down | -0.1468650087 |
| GSE28863_A4 | Up | 0.3093714602 |
| GSE48662 | Down | -0.2068753817 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-340-5p | MIMAT0004692 | MIRT019605 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-29c-3p | MIMAT0000681 | MIRT020392 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026613 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-96-5p | MIMAT0000095 | MIRT027915 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-24-3p | MIMAT0000080 | MIRT030544 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
