HCSGD entry for SLITRK4
1. General information
| Official gene symbol | SLITRK4 |
|---|---|
| Entrez ID | 139065 |
| Gene full name | SLIT and NTRK-like family, member 4 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0007409 | Axonogenesis | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7739801603 | 0.1973919570 | 0.9999902473 | 0.8599953200 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1717158485 |
| GSE13712_SHEAR | Down | -0.3789208053 |
| GSE13712_STATIC | Down | -0.7146612286 |
| GSE19018 | Up | 0.0163011054 |
| GSE19899_A1 | Up | 0.0798092539 |
| GSE19899_A2 | Up | 0.1766657983 |
| PubMed_21979375_A1 | Down | -0.2463634947 |
| PubMed_21979375_A2 | Down | -0.2004359647 |
| GSE35957 | Down | -0.1952633451 |
| GSE36640 | Down | -0.0059242794 |
| GSE54402 | Up | 0.1097238103 |
| GSE9593 | Up | 0.0248367497 |
| GSE43922 | Up | 0.1461759017 |
| GSE24585 | Up | 0.1955306074 |
| GSE37065 | Up | 0.3871030457 |
| GSE28863_A1 | Down | -0.3748514179 |
| GSE28863_A2 | Up | 0.0814180950 |
| GSE28863_A3 | Up | 0.0897246622 |
| GSE28863_A4 | Down | -0.1116568328 |
| GSE48662 | Down | -0.3778716004 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022913 | Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
