HCSGD entry for COX6B1
1. General information
| Official gene symbol | COX6B1 |
|---|---|
| Entrez ID | 1340 |
| Gene full name | cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous) |
| Other gene symbols | COX6B COXG COXVIb1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004129 | Cytochrome-c oxidase activity | IEA NAS | molecular_function |
| GO:0005739 | Mitochondrion | IDA IEA | cellular_component |
| GO:0005743 | Mitochondrial inner membrane | TAS | cellular_component |
| GO:0005758 | Mitochondrial intermembrane space | IEA | cellular_component |
| GO:0006810 | Transport | NAS | biological_process |
| GO:0006812 | Cation transport | NAS | biological_process |
| GO:0015672 | Monovalent inorganic cation transport | NAS | biological_process |
| GO:0022904 | Respiratory electron transport chain | TAS | biological_process |
| GO:0034220 | Ion transmembrane transport | NAS | biological_process |
| GO:0044237 | Cellular metabolic process | TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0055085 | Transmembrane transport | NAS | biological_process |
| GO:1902600 | Hydrogen ion transmembrane transport | NAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2357586338 | 0.3870732191 | 0.9195906370 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.6503386041 |
| GSE13712_SHEAR | Down | -0.4485117789 |
| GSE13712_STATIC | Down | -0.2727698327 |
| GSE19018 | Up | 0.2737844464 |
| GSE19899_A1 | Up | 0.0650513715 |
| GSE19899_A2 | Up | 0.1305388218 |
| PubMed_21979375_A1 | Up | 0.7074221142 |
| PubMed_21979375_A2 | Up | 0.2496604069 |
| GSE35957 | Down | -0.0693375396 |
| GSE36640 | Up | 0.0359514404 |
| GSE54402 | Up | 0.5367621570 |
| GSE9593 | Down | -0.1068649834 |
| GSE43922 | Up | 0.0301701819 |
| GSE24585 | Down | -0.1620739752 |
| GSE37065 | Down | -0.1113855542 |
| GSE28863_A1 | Down | -0.4850069083 |
| GSE28863_A2 | Down | -0.3422369861 |
| GSE28863_A3 | Down | -0.2722101427 |
| GSE28863_A4 | Up | 0.2890368911 |
| GSE48662 | Up | 0.1916374633 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-320b | MIMAT0005792 | MIRT036188 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-130b-5p | MIMAT0004680 | MIRT038293 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044502 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
