HCSGD entry for SLC31A1
1. General information
| Official gene symbol | SLC31A1 |
|---|---|
| Entrez ID | 1317 |
| Gene full name | solute carrier family 31 (copper transporters), member 1 |
| Other gene symbols | COPT1 CTR1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005375 | Copper ion transmembrane transporter activity | IEA | molecular_function |
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0005887 | Integral component of plasma membrane | TAS | cellular_component |
| GO:0006825 | Copper ion transport | TAS | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0068691501 | 0.9902777402 | 0.2162756272 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.4674330255 |
| GSE13712_SHEAR | Down | -0.0745442550 |
| GSE13712_STATIC | Down | -0.0825543760 |
| GSE19018 | Down | -0.2162140313 |
| GSE19899_A1 | Up | 0.8102005811 |
| GSE19899_A2 | Up | 0.7307404608 |
| PubMed_21979375_A1 | Up | 0.5064992464 |
| PubMed_21979375_A2 | Up | 1.2518989819 |
| GSE35957 | Up | 0.2722787640 |
| GSE36640 | Up | 1.1486985433 |
| GSE54402 | Up | 0.3055705160 |
| GSE9593 | Up | 0.6445603902 |
| GSE43922 | Up | 0.5579815158 |
| GSE24585 | Down | -0.1702725981 |
| GSE37065 | Down | -0.0722379124 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 0.2583590455 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-21-5p | MIMAT0000076 | MIRT030998 | Microarray | Functional MTI (Weak) | 18591254 |
| hsa-miR-183-5p | MIMAT0000261 | MIRT047052 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
