HCSGD entry for CCDC58
1. General information
| Official gene symbol | CCDC58 |
|---|---|
| Entrez ID | 131076 |
| Gene full name | coiled-coil domain containing 58 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005739 | Mitochondrion | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2170478439 | 0.0117669807 | 0.8956794795 | 0.2144866343 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3582118786 |
| GSE13712_SHEAR | Up | 2.0319556500 |
| GSE13712_STATIC | Up | 2.5438616672 |
| GSE19018 | Up | 0.0300436576 |
| GSE19899_A1 | Down | -0.1939820860 |
| GSE19899_A2 | Down | -0.8843821457 |
| PubMed_21979375_A1 | Up | 0.3639783332 |
| PubMed_21979375_A2 | Down | -0.1866737204 |
| GSE35957 | Down | -1.1955972055 |
| GSE36640 | Down | -1.7386888605 |
| GSE54402 | Up | 0.1817543836 |
| GSE9593 | Down | -0.9465816813 |
| GSE43922 | Up | 0.0472421136 |
| GSE24585 | Down | -0.6592508765 |
| GSE37065 | Down | -0.2378307905 |
| GSE28863_A1 | Up | 0.1874980593 |
| GSE28863_A2 | Down | -0.0234003977 |
| GSE28863_A3 | Down | -0.3352574267 |
| GSE28863_A4 | Down | -0.1742143005 |
| GSE48662 | Down | -0.3733628972 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-24-3p | MIMAT0000080 | MIRT030455 | Microarray | Functional MTI (Weak) | 19748357 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031625 | Proteomics | Functional MTI (Weak) | 18668040 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
