HCSGD entry for COL8A1
1. General information
| Official gene symbol | COL8A1 |
|---|---|
| Entrez ID | 1295 |
| Gene full name | collagen, type VIII, alpha 1 |
| Other gene symbols | C3orf7 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001525 | Angiogenesis | IEA | biological_process |
| GO:0005576 | Extracellular region | TAS | cellular_component |
| GO:0005591 | Collagen type VIII | TAS | cellular_component |
| GO:0005604 | Basement membrane | IEA | cellular_component |
| GO:0005788 | Endoplasmic reticulum lumen | TAS | cellular_component |
| GO:0007155 | Cell adhesion | IEA | biological_process |
| GO:0010811 | Positive regulation of cell-substrate adhesion | IEA | biological_process |
| GO:0022617 | Extracellular matrix disassembly | TAS | biological_process |
| GO:0030198 | Extracellular matrix organization | TAS | biological_process |
| GO:0030574 | Collagen catabolic process | TAS | biological_process |
| GO:0031012 | Extracellular matrix | IDA | cellular_component |
| GO:0048593 | Camera-type eye morphogenesis | IEA | biological_process |
| GO:0050673 | Epithelial cell proliferation | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4932297823 | 0.0041980852 | 0.9999902473 | 0.1320164875 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.6359454499 |
| GSE13712_SHEAR | Up | 0.2617709878 |
| GSE13712_STATIC | Up | 0.5101766995 |
| GSE19018 | Up | 0.3608900278 |
| GSE19899_A1 | Down | -0.0741996027 |
| GSE19899_A2 | Down | -0.5300071747 |
| PubMed_21979375_A1 | Down | -1.8988004836 |
| PubMed_21979375_A2 | Down | -1.0360215677 |
| GSE35957 | Up | 0.4470591803 |
| GSE36640 | Down | -0.5416072057 |
| GSE54402 | Down | -0.7233094252 |
| GSE9593 | Up | 0.1769869329 |
| GSE43922 | Down | -0.6713923897 |
| GSE24585 | Down | -0.3130151281 |
| GSE37065 | Down | -0.3215226723 |
| GSE28863_A1 | Down | -1.4878507570 |
| GSE28863_A2 | Up | 0.9649420710 |
| GSE28863_A3 | Up | 0.1129090098 |
| GSE28863_A4 | Down | -0.1916318794 |
| GSE48662 | Up | 0.1685890335 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
