HCSGD entry for TYW5
1. General information
| Official gene symbol | TYW5 |
|---|---|
| Entrez ID | 129450 |
| Gene full name | tRNA-yW synthesizing protein 5 |
| Other gene symbols | C2orf60 hTYW5 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000049 | TRNA binding | IDA | molecular_function |
| GO:0005506 | Iron ion binding | IDA | molecular_function |
| GO:0016706 | Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | IDA | molecular_function |
| GO:0031591 | Wybutosine biosynthetic process | IDA | biological_process |
| GO:0042803 | Protein homodimerization activity | IDA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2425645264 | 0.6863801071 | 0.9299221123 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1796020645 |
| GSE13712_SHEAR | Up | 0.4940292471 |
| GSE13712_STATIC | Up | 0.5298516339 |
| GSE19018 | Down | -0.0130036409 |
| GSE19899_A1 | Up | 0.0992373864 |
| GSE19899_A2 | Up | 0.2303738071 |
| PubMed_21979375_A1 | Up | 0.1940922220 |
| PubMed_21979375_A2 | Up | 0.0018045514 |
| GSE35957 | Down | -0.1369658170 |
| GSE36640 | Up | 0.0350281053 |
| GSE54402 | Down | -0.0657083001 |
| GSE9593 | Down | -0.1504150085 |
| GSE43922 | Down | -0.0409659981 |
| GSE24585 | Up | 0.4642862369 |
| GSE37065 | Up | 0.2950626395 |
| GSE28863_A1 | Down | -0.0540817598 |
| GSE28863_A2 | Up | 0.0264547607 |
| GSE28863_A3 | Down | -0.6134332399 |
| GSE28863_A4 | Down | -0.3113426294 |
| GSE48662 | Up | 0.0570271259 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-93-5p | MIMAT0000093 | MIRT028067 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
