HCSGD entry for XIRP2
1. General information
| Official gene symbol | XIRP2 |
|---|---|
| Entrez ID | 129446 |
| Gene full name | xin actin-binding repeat containing 2 |
| Other gene symbols | CMYA3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003281 | Ventricular septum development | IEA | biological_process |
| GO:0003779 | Actin binding | IEA | molecular_function |
| GO:0030018 | Z disc | IEA | cellular_component |
| GO:0030036 | Actin cytoskeleton organization | IEA | biological_process |
| GO:0030054 | Cell junction | IEA | cellular_component |
| GO:0045216 | Cell-cell junction organization | IEA | biological_process |
| GO:0051393 | Alpha-actinin binding | IEA | molecular_function |
| GO:0055008 | Cardiac muscle tissue morphogenesis | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0010702633 | 0.9920108848 | 0.0880325000 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0468516510 |
| GSE13712_SHEAR | Up | 0.2447494064 |
| GSE13712_STATIC | Up | 1.0912628681 |
| GSE19018 | Up | 0.1971050202 |
| GSE19899_A1 | Up | 0.8330289665 |
| GSE19899_A2 | Up | 2.3354054999 |
| PubMed_21979375_A1 | Up | 2.1880038078 |
| PubMed_21979375_A2 | Up | 3.8244799858 |
| GSE35957 | Up | 0.1261225148 |
| GSE36640 | Up | 0.3978802772 |
| GSE54402 | Up | 1.7930467869 |
| GSE9593 | Down | -0.0930320152 |
| GSE43922 | Up | 2.2112456709 |
| GSE24585 | Down | -0.0209866921 |
| GSE37065 | Down | -0.0297232342 |
| GSE28863_A1 | Up | 0.0425231568 |
| GSE28863_A2 | Up | 0.0934825336 |
| GSE28863_A3 | Up | 0.1609488696 |
| GSE28863_A4 | Down | -0.0531549007 |
| GSE48662 | Down | -0.0095790320 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018886 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
