HCSGD entry for PIFO
1. General information
| Official gene symbol | PIFO |
|---|---|
| Entrez ID | 128344 |
| Gene full name | primary cilia formation |
| Other gene symbols | C1orf88 pitchfork |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005794 | Golgi apparatus | IEA | cellular_component |
| GO:0005802 | Trans-Golgi network | ISS | cellular_component |
| GO:0016023 | Cytoplasmic membrane-bounded vesicle | IEA | cellular_component |
| GO:0017137 | Rab GTPase binding | IPI | molecular_function |
| GO:0019894 | Kinesin binding | IPI | molecular_function |
| GO:0019901 | Protein kinase binding | IPI | molecular_function |
| GO:0030030 | Cell projection organization | IEA | biological_process |
| GO:0031344 | Regulation of cell projection organization | ISS | biological_process |
| GO:0033674 | Positive regulation of kinase activity | IMP | biological_process |
| GO:0036064 | Ciliary basal body | ISS | cellular_component |
| GO:0043015 | Gamma-tubulin binding | IDA | molecular_function |
| GO:0048487 | Beta-tubulin binding | IDA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2686719236 | 0.5331946165 | 0.9656829808 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0782549861 |
| GSE13712_SHEAR | Down | -0.0885503879 |
| GSE13712_STATIC | Down | -0.1442165487 |
| GSE19018 | Up | 0.0153679666 |
| GSE19899_A1 | Up | 0.1082837476 |
| GSE19899_A2 | Up | 0.0528441947 |
| PubMed_21979375_A1 | Down | -0.2182249470 |
| PubMed_21979375_A2 | Up | 0.0323226248 |
| GSE35957 | Down | -0.1548425911 |
| GSE36640 | Up | 0.0983881583 |
| GSE54402 | Down | -0.0260753365 |
| GSE9593 | Up | 1.1475768558 |
| GSE43922 | Down | -0.1248792951 |
| GSE24585 | Up | 0.5940736299 |
| GSE37065 | Down | -0.0235966232 |
| GSE28863_A1 | Down | -0.6055608656 |
| GSE28863_A2 | Up | 0.2289422510 |
| GSE28863_A3 | Up | 0.0381617242 |
| GSE28863_A4 | Up | 0.1242207623 |
| GSE48662 | Up | 0.1075994411 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018591 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
