HCSGD entry for PODN
1. General information
| Official gene symbol | PODN |
|---|---|
| Entrez ID | 127435 |
| Gene full name | podocan |
| Other gene symbols | PCAN SLRR5A |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005518 | Collagen binding | IDA | molecular_function |
| GO:0005578 | Proteinaceous extracellular matrix | IEA | cellular_component |
| GO:0005615 | Extracellular space | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0008285 | Negative regulation of cell proliferation | IDA | biological_process |
| GO:0030336 | Negative regulation of cell migration | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3695638654 | 0.0940506782 | 0.9999902473 | 0.5842595941 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0983734352 |
| GSE13712_SHEAR | Down | -0.1652063538 |
| GSE13712_STATIC | Down | -0.0507111277 |
| GSE19018 | Up | 0.0761418462 |
| GSE19899_A1 | Down | -0.0925742253 |
| GSE19899_A2 | Down | -0.3044947860 |
| PubMed_21979375_A1 | Down | -0.1441115970 |
| PubMed_21979375_A2 | Down | -0.2301752774 |
| GSE35957 | Up | 0.7538325731 |
| GSE36640 | Up | 0.1324699672 |
| GSE54402 | Down | -0.3483497451 |
| GSE9593 | Up | 0.0746755544 |
| GSE43922 | Down | -0.8584373387 |
| GSE24585 | Up | 0.0201444620 |
| GSE37065 | Up | 0.0894358906 |
| GSE28863_A1 | Up | 0.7193741196 |
| GSE28863_A2 | Up | 0.5839970348 |
| GSE28863_A3 | Down | -1.0544515623 |
| GSE28863_A4 | Down | -0.1613551336 |
| GSE48662 | Up | 0.6857585702 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017543 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
