HCSGD entry for FAM213B
1. General information
| Official gene symbol | FAM213B |
|---|---|
| Entrez ID | 127281 |
| Gene full name | family with sequence similarity 213, member B |
| Other gene symbols | C1orf93 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001516 | Prostaglandin biosynthetic process | IEA ISS | biological_process |
| GO:0005829 | Cytosol | IEA | cellular_component |
| GO:0016616 | Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEA ISS | molecular_function |
| GO:0019369 | Arachidonic acid metabolic process | TAS | biological_process |
| GO:0019371 | Cyclooxygenase pathway | TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2077842559 | 0.1880641427 | 0.8788980235 | 0.8403974198 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3248925322 |
| GSE13712_SHEAR | Down | -0.3984628778 |
| GSE13712_STATIC | Down | -0.1859393915 |
| GSE19018 | Down | -0.3939929626 |
| GSE19899_A1 | Up | 0.0291642166 |
| GSE19899_A2 | Up | 0.9853471844 |
| PubMed_21979375_A1 | Up | 0.5005959532 |
| PubMed_21979375_A2 | Up | 1.7154977215 |
| GSE35957 | Down | -1.5374332945 |
| GSE36640 | Up | 0.1408762278 |
| GSE54402 | Up | 0.4119970212 |
| GSE9593 | Up | 0.2785412228 |
| GSE43922 | Up | 0.0689756076 |
| GSE24585 | Down | -0.1919239452 |
| GSE37065 | Down | -0.3082184201 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Down | -0.4528589914 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-128-3p | MIMAT0000424 | MIRT021925 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-760 | MIMAT0004957 | MIRT036744 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
