HCSGD entry for B3GALT6
1. General information
| Official gene symbol | B3GALT6 |
|---|---|
| Entrez ID | 126792 |
| Gene full name | UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6 |
| Other gene symbols | beta3GalT6 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0005797 | Golgi medial cisterna | IDA | cellular_component |
| GO:0005975 | Carbohydrate metabolic process | TAS | biological_process |
| GO:0006024 | Glycosaminoglycan biosynthetic process | IMP | biological_process |
| GO:0006486 | Protein glycosylation | IEA | biological_process |
| GO:0008499 | UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity | IEA | molecular_function |
| GO:0015012 | Heparan sulfate proteoglycan biosynthetic process | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030203 | Glycosaminoglycan metabolic process | TAS | biological_process |
| GO:0030204 | Chondroitin sulfate metabolic process | TAS | biological_process |
| GO:0030206 | Chondroitin sulfate biosynthetic process | IEA | biological_process |
| GO:0032580 | Golgi cisterna membrane | IEA | cellular_component |
| GO:0035250 | UDP-galactosyltransferase activity | IDA | molecular_function |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0047220 | Galactosylxylosylprotein 3-beta-galactosyltransferase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5775679192 | 0.7666395996 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0173682489 |
| GSE13712_SHEAR | Down | -0.1501444537 |
| GSE13712_STATIC | Down | -0.1990923573 |
| GSE19018 | Up | 0.0176482587 |
| GSE19899_A1 | Down | -0.0128698066 |
| GSE19899_A2 | Up | 0.4733600001 |
| PubMed_21979375_A1 | Up | 0.6837400854 |
| PubMed_21979375_A2 | Up | 0.2704309077 |
| GSE35957 | Up | 0.0050565308 |
| GSE36640 | Up | 0.2665136543 |
| GSE54402 | Up | 0.0189186845 |
| GSE9593 | Up | 0.0277165933 |
| GSE43922 | Up | 0.0361587842 |
| GSE24585 | Down | -0.1061686057 |
| GSE37065 | Down | -0.0809468790 |
| GSE28863_A1 | Down | -0.1364227839 |
| GSE28863_A2 | Up | 0.1303043500 |
| GSE28863_A3 | Up | 0.0843326414 |
| GSE28863_A4 | Down | -0.1272729781 |
| GSE48662 | Up | 0.0196215383 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
