HCSGD entry for CCSAP
1. General information
| Official gene symbol | CCSAP |
|---|---|
| Entrez ID | 126731 |
| Gene full name | centriole, cilia and spindle-associated protein |
| Other gene symbols | C1orf96 CSAP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005813 | Centrosome | IDA | cellular_component |
| GO:0005814 | Centriole | IDA | cellular_component |
| GO:0005819 | Spindle | IDA | cellular_component |
| GO:0005929 | Cilium | IDA | cellular_component |
| GO:0005930 | Axoneme | IDA | cellular_component |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0030424 | Axon | IDA | cellular_component |
| GO:0035869 | Ciliary transition zone | IDA | cellular_component |
| GO:0036064 | Ciliary basal body | IDA | cellular_component |
| GO:0045995 | Regulation of embryonic development | ISS | biological_process |
| GO:0060296 | Regulation of cilium beat frequency involved in ciliary motility | ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8784078037 | 0.2021021010 | 0.9999902473 | 0.8699950286 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.4456634099 |
| GSE13712_SHEAR | Down | -0.1573232410 |
| GSE13712_STATIC | Down | -0.1000400462 |
| GSE19018 | Up | 0.1366194568 |
| GSE19899_A1 | Down | -0.0655865774 |
| GSE19899_A2 | Down | -0.5247242667 |
| PubMed_21979375_A1 | Up | 0.7801988187 |
| PubMed_21979375_A2 | Down | -0.2830507183 |
| GSE35957 | Down | -0.1399700405 |
| GSE36640 | Down | -0.3184910440 |
| GSE54402 | Down | -0.2414867422 |
| GSE9593 | Up | 0.1058802705 |
| GSE43922 | Up | 0.0475438381 |
| GSE24585 | Up | 0.2409471722 |
| GSE37065 | Down | -0.0006317768 |
| GSE28863_A1 | Down | -0.0923362381 |
| GSE28863_A2 | Up | 0.3389313725 |
| GSE28863_A3 | Up | 0.1443399105 |
| GSE28863_A4 | Down | -0.1496786666 |
| GSE48662 | Down | -0.1402379089 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT003766 | Microarray | Functional MTI (Weak) | 15685193 |
| hsa-miR-335-5p | MIMAT0000765 | MIRT018151 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-221-3p | MIMAT0000278 | MIRT024191 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024942 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026639 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-29b-3p | MIMAT0000100 | MIRT048380 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049033 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | NA | hsa-miR-1 | 15685193 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
