HCSGD entry for RAVER1
1. General information
| Official gene symbol | RAVER1 |
|---|---|
| Entrez ID | 125950 |
| Gene full name | ribonucleoprotein, PTB-binding 1 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1724353102 | 0.2196675202 | 0.8151346624 | 0.9021483539 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0940900944 |
| GSE13712_SHEAR | Down | -0.2809872364 |
| GSE13712_STATIC | Down | -0.3010181632 |
| GSE19018 | Down | -0.4469032676 |
| GSE19899_A1 | Down | -0.1563716338 |
| GSE19899_A2 | Up | 0.0655230250 |
| PubMed_21979375_A1 | Up | 1.1387098071 |
| PubMed_21979375_A2 | Up | 1.6384439886 |
| GSE35957 | Down | -0.7393228327 |
| GSE36640 | Down | -0.5144565959 |
| GSE54402 | Up | 0.3009089326 |
| GSE9593 | Down | -0.7878811549 |
| GSE43922 | Up | 0.0875720723 |
| GSE24585 | Down | -0.1392873372 |
| GSE37065 | Down | -0.1274168066 |
| GSE28863_A1 | Up | 0.1312970096 |
| GSE28863_A2 | Up | 0.1868958779 |
| GSE28863_A3 | Up | 0.4143233301 |
| GSE28863_A4 | Up | 0.0867258749 |
| GSE48662 | Up | 0.4794690899 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016348 | Proteomics | Functional MTI (Weak) | 21512034 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022658 | Proteomics;Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-361-5p | MIMAT0000703 | MIRT044108 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049468 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7a-5p | MIMAT0000062 | MIRT052550 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
