HCSGD entry for CNGA1

1. General information

Official gene symbolCNGA1
Entrez ID1259
Gene full namecyclic nucleotide gated channel alpha 1
Other gene symbolsCNCG CNCG1 CNG-1 CNG1 RCNC1 RCNCa RCNCalpha RP49
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005222Intracellular cAMP activated cation channel activityIBAmolecular_function
GO:0005223Intracellular cGMP activated cation channel activityIBAmolecular_function
GO:0005249Voltage-gated potassium channel activityIBAmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005886Plasma membraneTAScellular_component
GO:0005887Integral component of plasma membraneTAScellular_component
GO:0006810TransportTASbiological_process
GO:0007601Visual perceptionIEAbiological_process
GO:0007603Phototransduction, visible lightTASbiological_process
GO:0016056Rhodopsin mediated signaling pathwayTASbiological_process
GO:0022400Regulation of rhodopsin mediated signaling pathwayTASbiological_process
GO:0030553CGMP bindingIBAmolecular_function
GO:0034765Regulation of ion transmembrane transportIBAbiological_process
GO:0042391Regulation of membrane potentialIBAbiological_process
GO:0042622Photoreceptor outer segment membraneIEAcellular_component
GO:0051049Regulation of transportIBAbiological_process
GO:0071805Potassium ion transmembrane transportIBAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.54542839560.90461632160.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.1272063861
GSE13712_SHEARUp0.1870404524
GSE13712_STATICDown-0.0733278239
GSE19018Up0.1366319192
GSE19899_A1Up0.1553209412
GSE19899_A2Down-0.1198437301
PubMed_21979375_A1Up0.1155551656
PubMed_21979375_A2Down-0.0924348980
GSE35957Up0.2412596352
GSE36640Up0.0170652729
GSE54402Up0.0302730747
GSE9593Up0.1382800755
GSE43922Up0.0230953736
GSE24585Up0.0390711696
GSE37065Down-0.0420717198
GSE28863_A1Down-0.0447842486
GSE28863_A2Up0.1543857625
GSE28863_A3Up0.0466947835
GSE28863_A4Down-0.1085571484
GSE48662Up0.0950853470

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.