HCSGD entry for ANKRD13B
1. General information
| Official gene symbol | ANKRD13B |
|---|---|
| Entrez ID | 124930 |
| Gene full name | ankyrin repeat domain 13B |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005769 | Early endosome | IEA | cellular_component |
| GO:0005770 | Late endosome | IEA | cellular_component |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3063999582 | 0.2217247787 | 0.9999902473 | 0.9055109232 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0971940669 |
| GSE13712_SHEAR | Down | -0.8192492355 |
| GSE13712_STATIC | Down | -0.6045600720 |
| GSE19018 | Down | -0.2483119162 |
| GSE19899_A1 | Up | 0.0299774737 |
| GSE19899_A2 | Up | 0.2166010842 |
| PubMed_21979375_A1 | Up | 0.6800622975 |
| PubMed_21979375_A2 | Up | 0.3888141106 |
| GSE35957 | Down | -0.2075969094 |
| GSE36640 | Up | 0.5694802564 |
| GSE54402 | Down | -0.2778339621 |
| GSE9593 | Up | 0.0862341385 |
| GSE43922 | Up | 0.1438438620 |
| GSE24585 | Down | -0.4587954657 |
| GSE37065 | Down | -0.3247440525 |
| GSE28863_A1 | Up | 0.0201304222 |
| GSE28863_A2 | Up | 0.0361028258 |
| GSE28863_A3 | Up | 0.3462443907 |
| GSE28863_A4 | Down | -0.0564436723 |
| GSE48662 | Up | 0.1936175572 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-373-3p | MIMAT0000726 | MIRT003948 | Microarray | Functional MTI (Weak) | 15685193 |
| hsa-miR-505-3p | MIMAT0002876 | MIRT040994 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-373-3p | MIMAT0000726 | NA | hsa-miR-373 | 15685193 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
