HCSGD entry for ZC3H18
1. General information
| Official gene symbol | ZC3H18 |
|---|---|
| Entrez ID | 124245 |
| Gene full name | zinc finger CCCH-type containing 18 |
| Other gene symbols | NHN1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5084516508 | 0.6797967934 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0136405915 |
| GSE13712_SHEAR | Down | -0.1044645137 |
| GSE13712_STATIC | Up | 0.0425352588 |
| GSE19018 | Down | -0.1673177769 |
| GSE19899_A1 | Down | -0.0599454189 |
| GSE19899_A2 | Up | 0.1415929351 |
| PubMed_21979375_A1 | Up | 0.8370292101 |
| PubMed_21979375_A2 | Down | -0.1014313910 |
| GSE35957 | Down | -0.0640817799 |
| GSE36640 | Down | -0.2336804274 |
| GSE54402 | Up | 0.1001758299 |
| GSE9593 | Down | -0.2286470467 |
| GSE43922 | Up | 0.0851009130 |
| GSE24585 | Down | -0.1706319779 |
| GSE37065 | Down | -0.1785490561 |
| GSE28863_A1 | Up | 0.0484403584 |
| GSE28863_A2 | Up | 0.0546643236 |
| GSE28863_A3 | Up | 0.3920056337 |
| GSE28863_A4 | Up | 0.1286355922 |
| GSE48662 | Up | 0.1963887061 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1914-3p | MIMAT0007890 | MIRT035777 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-29b-2-5p | MIMAT0004515 | MIRT038709 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-93-3p | MIMAT0004509 | MIRT038721 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT041631 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-18b-5p | MIMAT0001412 | MIRT042403 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-106b-5p | MIMAT0000680 | MIRT044256 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-218-5p | MIMAT0000275 | MIRT046984 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-183-5p | MIMAT0000261 | MIRT047038 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-10b-5p | MIMAT0000254 | MIRT047405 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-10a-5p | MIMAT0000253 | MIRT047551 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049259 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-31-5p | MIMAT0000089 | MIRT049858 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-18a-5p | MIMAT0000072 | MIRT050651 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-17-5p | MIMAT0000070 | MIRT050795 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7f-5p | MIMAT0000067 | MIRT051354 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7a-5p | MIMAT0000062 | MIRT052361 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
