HCSGD entry for CMTM3
1. General information
| Official gene symbol | CMTM3 |
|---|---|
| Entrez ID | 123920 |
| Gene full name | CKLF-like MARVEL transmembrane domain containing 3 |
| Other gene symbols | BNAS2 CKLFSF3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005125 | Cytokine activity | IEA | molecular_function |
| GO:0005615 | Extracellular space | IEA | cellular_component |
| GO:0006935 | Chemotaxis | IEA | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0753692185 | 0.7908260400 | 0.5819001173 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2580647694 |
| GSE13712_SHEAR | Down | -0.2552982689 |
| GSE13712_STATIC | Down | -0.4421119576 |
| GSE19018 | Down | -0.3838177544 |
| GSE19899_A1 | Up | 0.2868533049 |
| GSE19899_A2 | Up | 0.7515726107 |
| PubMed_21979375_A1 | Up | 0.3588826201 |
| PubMed_21979375_A2 | Up | 0.4129060731 |
| GSE35957 | Up | 0.0285978261 |
| GSE36640 | Down | -0.1063651246 |
| GSE54402 | Up | 0.4777918381 |
| GSE9593 | Up | 0.0373275572 |
| GSE43922 | Up | 0.4324977795 |
| GSE24585 | Down | -0.3278059169 |
| GSE37065 | Down | -0.0359550506 |
| GSE28863_A1 | Up | 0.4239545835 |
| GSE28863_A2 | Up | 0.2983325006 |
| GSE28863_A3 | Down | -0.1406935214 |
| GSE28863_A4 | Up | 0.0478193912 |
| GSE48662 | Up | 0.2131062792 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018895 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-132-3p | MIMAT0000426 | MIRT021850 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT023087 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-24-3p | MIMAT0000080 | MIRT030605 | Microarray | Functional MTI (Weak) | 19748357 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
