HCSGD entry for ZNF641
1. General information
| Official gene symbol | ZNF641 |
|---|---|
| Entrez ID | 121274 |
| Gene full name | zinc finger protein 641 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000981 | Sequence-specific DNA binding RNA polymerase II transcription factor activity | IBA | molecular_function |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IDA IEA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006357 | Regulation of transcription from RNA polymerase II promoter | IBA | biological_process |
| GO:0006366 | Transcription from RNA polymerase II promoter | IBA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3050732077 | 0.3491556552 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0345932920 |
| GSE13712_SHEAR | Down | -0.1277820419 |
| GSE13712_STATIC | Down | -0.5633701035 |
| GSE19018 | Down | -0.3421672204 |
| GSE19899_A1 | Up | 0.0858820818 |
| GSE19899_A2 | Down | -0.3001410608 |
| PubMed_21979375_A1 | Down | -0.3967391033 |
| PubMed_21979375_A2 | Up | 0.2353506075 |
| GSE35957 | Down | -0.3422456879 |
| GSE36640 | Up | 0.5103675843 |
| GSE54402 | Down | -0.0060398814 |
| GSE9593 | Up | 0.0176953673 |
| GSE43922 | Up | 0.3011070908 |
| GSE24585 | Up | 0.4487293705 |
| GSE37065 | Up | 0.2068399463 |
| GSE28863_A1 | Up | 0.3258758294 |
| GSE28863_A2 | Up | 0.2520006117 |
| GSE28863_A3 | Up | 0.0409364418 |
| GSE28863_A4 | Down | -0.2129021076 |
| GSE48662 | Down | -0.1213989074 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT016736 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026107 | Microarray | Functional MTI (Weak) | 19074876 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
