HCSGD entry for SLC15A4
1. General information
| Official gene symbol | SLC15A4 |
|---|---|
| Entrez ID | 121260 |
| Gene full name | solute carrier family 15, member 4 |
| Other gene symbols | PHT1 PTR4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005215 | Transporter activity | IEA | molecular_function |
| GO:0005290 | L-histidine transmembrane transporter activity | IEA | molecular_function |
| GO:0005765 | Lysosomal membrane | TAS | cellular_component |
| GO:0006811 | Ion transport | TAS | biological_process |
| GO:0006857 | Oligopeptide transport | IEA | biological_process |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0015293 | Symporter activity | IEA | molecular_function |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0239196307 | 0.9890843585 | 0.3664660070 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0670864047 |
| GSE13712_SHEAR | Up | 0.7227477364 |
| GSE13712_STATIC | Up | 0.1870776043 |
| GSE19018 | Up | 0.3995963821 |
| GSE19899_A1 | Up | 0.0824842766 |
| GSE19899_A2 | Up | 0.5317370987 |
| PubMed_21979375_A1 | Up | 0.5302672764 |
| PubMed_21979375_A2 | Up | 0.6016314556 |
| GSE35957 | Up | 0.1609046242 |
| GSE36640 | Up | 0.3612095427 |
| GSE54402 | Up | 0.1097621136 |
| GSE9593 | Up | 0.3192346755 |
| GSE43922 | Up | 0.1351826385 |
| GSE24585 | Down | -0.1063966075 |
| GSE37065 | Up | 0.2645530776 |
| GSE28863_A1 | Up | 0.2157393471 |
| GSE28863_A2 | Up | 0.7032587161 |
| GSE28863_A3 | Down | -0.4620089091 |
| GSE28863_A4 | Up | 0.0491259116 |
| GSE48662 | Up | 0.1775809133 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT002585 | Microarray | Functional MTI (Weak) | 15685193 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT002585 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-151a-5p | MIMAT0004697 | MIRT038188 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT044921 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
