HCSGD entry for LRIG3
1. General information
| Official gene symbol | LRIG3 |
|---|---|
| Entrez ID | 121227 |
| Gene full name | leucine-rich repeats and immunoglobulin-like domains 3 |
| Other gene symbols | LIG3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030659 | Cytoplasmic vesicle membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9835031876 | 0.0001216709 | 0.9999902473 | 0.0197282209 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -1.1551028207 |
| GSE13712_SHEAR | Down | -1.0064163201 |
| GSE13712_STATIC | Down | -1.3139041160 |
| GSE19018 | Down | -0.0147667064 |
| GSE19899_A1 | Down | -0.9714024397 |
| GSE19899_A2 | Down | -1.3875980545 |
| PubMed_21979375_A1 | Down | -2.1218701746 |
| PubMed_21979375_A2 | Down | -1.5896210498 |
| GSE35957 | Down | -0.2933821236 |
| GSE36640 | Down | -2.1854144104 |
| GSE54402 | Down | -1.9716833953 |
| GSE9593 | Down | -0.1331635414 |
| GSE43922 | Down | -1.6069030815 |
| GSE24585 | Down | -1.2908160445 |
| GSE37065 | Up | 0.1739674675 |
| GSE28863_A1 | Up | 0.5547300437 |
| GSE28863_A2 | Up | 0.2494231739 |
| GSE28863_A3 | Down | -0.1460378518 |
| GSE28863_A4 | Up | 0.0248708281 |
| GSE48662 | Down | -0.2272985706 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-374b-5p | MIMAT0004955 | MIRT016034 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-19b-3p | MIMAT0000074 | MIRT031125 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-93-3p | MIMAT0004509 | MIRT038852 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-27b-3p | MIMAT0000419 | MIRT046227 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-99a-5p | MIMAT0000097 | MIRT048604 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-18a-5p | MIMAT0000072 | MIRT050669 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7f-5p | MIMAT0000067 | MIRT051405 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
