HCSGD entry for CLPTM1
1. General information
| Official gene symbol | CLPTM1 |
|---|---|
| Entrez ID | 1209 |
| Gene full name | cleft lip and palate associated transmembrane protein 1 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005887 | Integral component of plasma membrane | TAS | cellular_component |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0009897 | External side of plasma membrane | IEA ISS | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030154 | Cell differentiation | IEA | biological_process |
| GO:0033081 | Regulation of T cell differentiation in thymus | IEA ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0093081950 | 0.9724703469 | 0.2469768145 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.5761631226 |
| GSE13712_SHEAR | Down | -0.0389713685 |
| GSE13712_STATIC | Down | -0.0641344276 |
| GSE19018 | Down | -0.0516871435 |
| GSE19899_A1 | Up | 0.0422558044 |
| GSE19899_A2 | Up | 1.1120462080 |
| PubMed_21979375_A1 | Up | 0.9384180707 |
| PubMed_21979375_A2 | Up | 1.9608591938 |
| GSE35957 | Up | 0.4260940632 |
| GSE36640 | Up | 0.7253685664 |
| GSE54402 | Up | 0.1370222765 |
| GSE9593 | Up | 0.5441005783 |
| GSE43922 | Up | 0.2282637469 |
| GSE24585 | Down | -0.1728694221 |
| GSE37065 | Up | 0.0397463502 |
| GSE28863_A1 | Up | 0.0103704501 |
| GSE28863_A2 | Up | 0.2132125890 |
| GSE28863_A3 | Down | -0.0497638181 |
| GSE28863_A4 | Down | -0.1673409269 |
| GSE48662 | Up | 0.9774190810 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-186-5p | MIMAT0000456 | MIRT044966 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-10b-5p | MIMAT0000254 | MIRT047428 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-17-5p | MIMAT0000070 | MIRT050963 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
