HCSGD entry for FAT3
1. General information
| Official gene symbol | FAT3 |
|---|---|
| Entrez ID | 120114 |
| Gene full name | FAT atypical cadherin 3 |
| Other gene symbols | CDHF15 CDHR10 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0007156 | Homophilic cell adhesion | IEA | biological_process |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7849573534 | 0.2008913985 | 0.9999902473 | 0.8667384855 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1047531424 |
| GSE13712_SHEAR | Down | -0.1400855451 |
| GSE13712_STATIC | Down | -0.1655793724 |
| GSE19018 | Down | -0.6379595559 |
| GSE19899_A1 | Up | 0.0875256353 |
| GSE19899_A2 | Up | 0.2752316202 |
| PubMed_21979375_A1 | Down | -0.3089427591 |
| PubMed_21979375_A2 | Down | -0.2321917094 |
| GSE35957 | Up | 0.0674952027 |
| GSE36640 | Down | -0.4100247190 |
| GSE54402 | Up | 0.6359342552 |
| GSE9593 | Up | 0.0633202337 |
| GSE43922 | Up | 0.0113561598 |
| GSE24585 | Down | -0.3858926651 |
| GSE37065 | Up | 0.1203023996 |
| GSE28863_A1 | Up | 0.0170860817 |
| GSE28863_A2 | Down | -0.1442314079 |
| GSE28863_A3 | Down | -0.2956851634 |
| GSE28863_A4 | Up | 0.0328206589 |
| GSE48662 | Up | 0.1372219390 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-130b-3p | MIMAT0000691 | MIRT020303 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-132-3p | MIMAT0000426 | MIRT021824 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-19b-3p | MIMAT0000074 | MIRT031285 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031999 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-1303 | MIMAT0005891 | MIRT035881 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-296-3p | MIMAT0004679 | MIRT038339 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
