HCSGD entry for SFR1
1. General information
| Official gene symbol | SFR1 |
|---|---|
| Entrez ID | 119392 |
| Gene full name | SWI5-dependent recombination repair 1 |
| Other gene symbols | C10orf78 MEI5 MEIR5 bA373N18.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000724 | Double-strand break repair via homologous recombination | IMP | biological_process |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | ISS | cellular_component |
| GO:0032798 | Swi5-Sfr1 complex | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0043126515 | 0.8647509745 | 0.1760215926 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2210818621 |
| GSE13712_SHEAR | Down | -0.0278073913 |
| GSE13712_STATIC | Up | 0.4558663150 |
| GSE19018 | Down | -0.5586889216 |
| GSE19899_A1 | Up | 0.4340998352 |
| GSE19899_A2 | Up | 1.2605863398 |
| PubMed_21979375_A1 | Up | 2.4901931023 |
| PubMed_21979375_A2 | Up | 0.5768398912 |
| GSE35957 | Down | -0.2469155762 |
| GSE36640 | Down | -0.2300541803 |
| GSE54402 | Up | 0.8321035062 |
| GSE9593 | Up | 0.1338403432 |
| GSE43922 | Up | 0.9748519147 |
| GSE24585 | Up | 0.1611842215 |
| GSE37065 | Up | 0.6915629025 |
| GSE28863_A1 | Down | -0.0212312878 |
| GSE28863_A2 | Down | -0.0466662563 |
| GSE28863_A3 | Up | 0.0511612510 |
| GSE28863_A4 | Up | 0.3819673910 |
| GSE48662 | Down | -0.5937648978 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024791 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026334 | Microarray | Functional MTI (Weak) | 19074876 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
