HCSGD entry for RAB3IP

1. General information

Official gene symbolRAB3IP
Entrez ID117177
Gene full nameRAB3A interacting protein
Other gene symbolsRABIN3
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005515Protein bindingIPImolecular_function
GO:0005634NucleusIDAcellular_component
GO:0005813CentrosomeIDAcellular_component
GO:0005829CytosolIDAcellular_component
GO:0005856CytoskeletonIEAcellular_component
GO:0006893Golgi to plasma membrane transportTASbiological_process
GO:0015031Protein transportIEAbiological_process
GO:0017112Rab guanyl-nucleotide exchange factor activityIDAmolecular_function
GO:0030027LamellipodiumIEAcellular_component
GO:0032313Regulation of Rab GTPase activityIDAbiological_process
GO:0032318Regulation of Ras GTPase activityIDAbiological_process
GO:0033365Protein localization to organelleIMPbiological_process
GO:0036064Ciliary basal bodyTAScellular_component
GO:0042384Cilium assemblyIMPbiological_process
GO:0043087Regulation of GTPase activityIDAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.13551373050.94856345120.74349393621.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0865384964
GSE13712_SHEARUp0.3089574232
GSE13712_STATICUp0.1851941277
GSE19018Up0.0302443442
GSE19899_A1Up0.0622533586
GSE19899_A2Up0.1104302491
PubMed_21979375_A1Up0.6232496813
PubMed_21979375_A2Up0.2686003956
GSE35957Up0.0739475156
GSE36640Up0.3151548058
GSE54402Up0.4332026477
GSE9593Down-0.0109544919
GSE43922Up0.2138494029
GSE24585Down-0.0733236665
GSE37065Down-0.0619635522
GSE28863_A1Down-0.2095944400
GSE28863_A2Down-0.3006759467
GSE28863_A3Up0.3285239240
GSE28863_A4Down-0.0288814821
GSE48662Up0.1953644662

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-484MIMAT0002174MIRT042106CLASHFunctional MTI (Weak)23622248
hsa-miR-182-5pMIMAT0000259MIRT047202CLASHFunctional MTI (Weak)23622248
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.